PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D01698.1.p
Common NameEUGRSUZ_D01698, LOC104441630
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Dof
Protein Properties Length: 305aa    MW: 32682.2 Da    PI: 8.5734
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D01698.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.81.3e-3945106263
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                       ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt GG+lrn+PvGgg+rknk+sss
  Eucgr.D01698.1.p  45 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTDGGSLRNIPVGGGSRKNKRSSS 106
                       7899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-273997IPR003851Zinc finger, Dof-type
PfamPF027012.1E-3347103IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.0449103IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105187IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MDTAQWPQEI VVKPIEDIVT STCTAAATPK PSSSSVSERK PRPQKEQALN CPRCNSTNTK  60
FCYYNNYSLT QPRYFCKTCR RYWTDGGSLR NIPVGGGSRK NKRSSSSASS SSSSFNSSSK  120
KLPDLISTPA SNPNNKVTLH EGQDLNLAFP NPHHHDFKSI SELVQVPSLE ASKNHHISAN  180
SSSAGASMAP PQLSALELLS GITSRGSFSS FMSMPVHDPG SVYTPGLFAL PDFKPTLNFS  240
LDGLGSGGYR SLPSVQEGGT NGGRLLFPFE DLKPVSSTSD MEQNRGDQGD SNGYWSGMLG  300
GGSW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D01698.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN9770161e-54JN977016.1 Molineria latifolia clone CL27 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053092.10.0PREDICTED: dof zinc finger protein DOF1.8
SwissprotQ8LAP84e-70DOF46_ARATH; Dof zinc finger protein DOF4.6
TrEMBLA0A059CG340.0A0A059CG34_EUCGR; Uncharacterized protein
STRINGPOPTR_0003s14450.11e-117(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM34332761
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.13e-57Dof family protein